ELFA is managed and represented by a management board of one to three members appointed by the supervisory board for two years.
From November 2020, the supervisory board consists of the following six members:
| Chairman of the supervisory board: | Toomas Orutar (Logistika Pluss OÜ) |
| Members of the supervisory board of ELFA: | Andres Matkur- (ACE Logistics Estonia AS) Remo Kirss- (DPD Eesti AS); Rainer Rohtla – (Via3L OÜ); Joel Timm – (Balti Logistika AS); Raul Toomsalu – (Operail AS). |
| Members of the management board of ELFA: | Herkki Kitsing |